PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DS_5FA136FBB.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 112aa    MW: 11538.6 Da    PI: 9.2407
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DS_5FA136FBB.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.25.6e-1639100263
                            XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            ++ kr  r+ +NRe+A  sRqRKk+++eeLe kvk+++a   +L  +++  + e a+lk+++
  Traes_2DS_5FA136FBB.1  39 EDAKRRARLVRNRESAHLSRQRKKQYVEELEGKVKAMQATIADLSTRISCVTAENAALKQQL 100
                            678********************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.5E-1438102IPR004827Basic-leucine zipper domain
PfamPF001702.4E-1439100IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.23140103IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-1742101No hitNo description
SuperFamilySSF579592.75E-1442100No hitNo description
CDDcd147041.19E-164394No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
SGSGGGADGG LKNDESSETS SRSASAGSDD KARDGGEGED AKRRARLVRN RESAHLSRQR  60
KKQYVEELEG KVKAMQATIA DLSTRISCVT AENAALKQQL AGAGGAGVPP PL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3591291e-144AK359129.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1090D13.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002461117.12e-37hypothetical protein SORBIDRAFT_02g041070
SwissprotQ9LXX42e-24BZP49_ARATH; bZIP transcription factor 49
TrEMBLN1QRE53e-69N1QRE5_AEGTA; Putative TGACG-sequence-specific DNA-binding protein TGA-1B
TrEMBLW5C5E24e-74W5C5E2_WHEAT; Uncharacterized protein
STRINGMLOC_58500.17e-51(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69343750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-18bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]